Node 75
Ancestral DNA sequence:
Probabilities of bases and MPB (most probable base) at each site.
Site	A	C	G	T	MPB	Probability
1	1	0	0	0	A	1
2	0	0	0	1	T	1
3	0	0	1	0	G	1
4	1	0	0	0	A	1
5	0	0	0	1	T	1
6	0	1	0	0	C	1
7	0	0	1	0	G	1
8	0	0	0	1	T	1
9	0.02	0	0.98	0	G	0.98
10	0	0.01	0	0.99	T	0.99
11	0	0	0	1	T	1
12	1	0	0	0	A	1
13	0	0	1	0	G	1
14	1	0	0	0	A	1
15	0	0.99	0	0.01	C	0.99
16	1	0	0	0	A	1
17	0.41	0	0.59	0	G	0.59
18	0	1	0	0	C	1
19	0	0.02	0	0.98	T	0.98
20	0	0	0	1	T	1
21	1	0	0	0	A	1
22	0	0	1	0	G	1
23	1	0	0	0	A	1
24	0.04	0	0.95	0	G	0.95
25	0	1	0	0	C	1
26	1	0	0	0	A	1
27	1	0	0	0	A	1
28	0	0	0	1	T	1
29	0	0	0	1	T	1
30	0	0.99	0	0.01	C	0.99
31	1	0	0	0	A	1
32	1	0	0	0	A	1
33	1	0	0	0	A	1
34	0.02	0.39	0.5	0.1	G	0.5
35	0.15	0.06	0.01	0.79	T	0.79
36	0	0	1	0	G	1
37	0	0	1	0	G	1
38	0	0	0	1	T	1
39	0.91	0	0.09	0	A	0.91
40	0	0	0	1	T	1
41	1	0	0	0	A	1
42	0	0.36	0	0.64	T	0.64
43	0	1	0	0	C	1
44	0	0	1	0	G	1
45	0	0.99	0	0.01	C	0.99
46	0.95	0	0.05	0	A	0.95
47	1	0	0	0	A	1
48	0	0.98	0	0.02	C	0.98
49	0	0	1	0	G	1
50	0	0	1	0	G	1
51	0	0.08	0	0.92	T	0.92
52	0	1	0	0	C	1
53	0	0	1	0	G	1
54	0	0.01	0	0.99	T	0.99
55	1	0	0	0	A	1
56	1	0	0	0	A	1
57	1	0	0	0	A	1
58	0	0	0	1	T	1
59	0	0	1	0	G	1
60	0	0	1	0	G	1
61	1	0	0	0	A	1
62	1	0	0	0	A	1
63	0	0.99	0	0.01	C	0.99
64	0	1	0	0	C	1
65	0	0	1	0	G	1
66	0	1	0	0	C	1
67	0	0	0	1	T	1
68	0	0	1	0	G	1
69	0	0	0	1	T	1
70	0	0	1	0	G	1
71	0	0	0	1	T	1
72	0.31	0	0.69	0	G	0.69
73	0	0	1	0	G	1
74	1	0	0	0	A	1
75	1	0	0	0	A	1
76	0	0	1	0	G	1
77	0	1	0	0	C	1
78	0.02	0.84	0.07	0.07	C	0.84
79	1	0	0	0	A	1
80	0	0	0	1	T	1
81	0	0.01	0	0.99	T	0.99
82	0.13	0	0.87	0	G	0.87
83	1	0	0	0	A	1
84	0.09	0.72	0.04	0.15	C	0.72
85	1	0	0	0	A	1
86	1	0	0	0	A	1
87	0	1	0	0	C	1
88	1	0	0	0	A	1
89	0	0	0	1	T	1
90	0	0.99	0	0.01	C	0.99
91	0	0	1	0	G	1
92	0.66	0	0.33	0	A	0.66
93	0	0.99	0	0.01	C	0.99
94	1	0	0	0	A	1
95	1	0	0	0	A	1
96	0	0.57	0	0.43	C	0.57
97	1	0	0	0	A	1
98	0	0	0	1	T	1
99	0	1	0	0	C	1
100	1	0	0	0	A	1
101	1	0	0	0	A	1
102	1	0	0	0	A	1
103	0	0	1	0	G	1
104	1	0	0	0	A	1
105	0	0.15	0	0.84	T	0.84
106	0	0	1	0	G	1
107	0	0	1	0	G	1
108	0	1	0	0	C	1
109	0	0	1	0	G	1
110	0	0	0	1	T	1
111	0.08	0.04	0.86	0.01	G	0.86
112	1	0	0	0	A	1
113	0	0	0	1	T	1
114	0	0	1	0	G	1
115	0	1	0	0	C	1
116	1	0	0	0	A	1
117	0	0.9	0	0.1	C	0.9
118	0	0	0	1	T	1
119	0	1	0	0	C	1
120	0.03	0.19	0.74	0.05	G	0.74
121	1	0	0	0	A	1
122	0	0	0	1	T	1
123	0	0.35	0	0.65	T	0.65
124	0	0	1	0	G	1
125	0	0	1	0	G	1
126	0	0.79	0	0.21	C	0.79
127	0	0	1	0	G	1
128	1	0	0	0	A	1
129	0	0	0	1	T	1
130	0	0	0	1	T	1
131	0	1	0	0	C	1
132	0.79	0.01	0.18	0.02	A	0.79
133	0	1	0	0	C	1
134	0	0	0	1	T	1
135	0	0	1	0	G	1
136	0	0	1	0	G	1
137	0	0	0	1	T	1
138	0	0.02	0.03	0.95	T	0.95
139	0	0	0	1	T	1
140	1	0	0	0	A	1
141	0	0.98	0	0.02	C	0.98
142	1	0	0	0	A	1
143	0	0	0	1	T	1
144	0	0	1	0	G	1
145	0.45	0	0.55	0	G	0.55
146	0	0	0	1	T	1
147	0	0.01	0	0.99	T	0.99
148	0	0	1	0	G	1
149	1	0	0	0	A	1
150	0.99	0	0.01	0	A	0.99
151	0	0	1	0	G	1
152	1	0	0	0	A	1
153	0	0.7	0	0.3	C	0.7
154	0	0	1	0	G	1
155	0	0	1	0	G	1
156	0	0.9	0	0.1	C	0.9
157	0.92	0	0.08	0	A	0.92
158	0	0.02	0	0.98	T	0.98
159	0	0.93	0	0.07	C	0.93
160	0.02	0	0.98	0	G	0.98
161	0	1	0	0	C	1
162	0.32	0.29	0.13	0.26	A	0.32
163	0.25	0.7	0.02	0.03	C	0.7
164	0.99	0	0.01	0	A	0.99
165	0.96	0	0.04	0	A	0.96
166	0.47	0.48	0.04	0.01	C	0.48
167	1	0	0	0	A	1
168	0.41	0.29	0.26	0.04	A	0.41
169	1	0	0	0	A	1
170	0	1	0	0	C	1
171	0	0.95	0	0.04	C	0.95
172	0	0	1	0	G	1
173	1	0	0	0	A	1
174	0.87	0.01	0.12	0	A	0.87
175	0.99	0	0	0	A	0.99
176	0.15	0.43	0	0.42	C	0.43
177	0.04	0.76	0.19	0.01	C	0.76
178	0	0	0	1	T	1
179	0	0	0	1	T	1
180	0	0.3	0	0.7	T	0.7
181	0.62	0	0.38	0	A	0.62
182	0.01	0.02	0	0.98	T	0.98
183	0.08	0.85	0.01	0.06	C	0.85
184	0	0	1	0	G	1
185	0	0	1	0	G	1
186	0	0.51	0	0.48	C	0.51
187	1	0	0	0	A	1
188	1	0	0	0	A	1
189	0	0.99	0	0.01	C	0.99
190	0	1	0	0	C	1
191	0	0	1	0	G	1
192	0	0.01	0	0.99	T	0.99
193	0	1	0	0	C	1
194	0	0	1	0	G	1
195	0	0.02	0	0.98	T	0.98
196	0	0	0	1	T	1
197	1	0	0	0	A	1
198	0	1	0	0	C	1
199	0	0	0	1	T	1
200	0	0	0	1	T	1
201	0	1	0	0	C	1
202	0	0	1	0	G	1
203	1	0	0	0	A	1
204	0	0.01	0	0.99	T	0.99
205	0	0	1	0	G	1
206	0	0	0	1	T	1
207	0	0	1	0	G	1
208	0	1	0	0	C	1
209	1	0	0	0	A	1
210	0	0	0	1	T	1
211	0	0	0	1	T	1
212	1	0	0	0	A	1
213	0	1	0	0	C	1
214	0	0	0	1	T	1
215	1	0	0	0	A	1
216	0	1	0	0	C	1
217	0	1	0	0	C	1
218	0	0	0	1	T	1
219	0.01	0.96	0.01	0.03	C	0.96
220	0	0	1	0	G	1
221	1	0	0	0	A	1
222	1	0	0	0	A	1
223	0	0	1	0	G	1
224	0	0	1	0	G	1
225	0	0.92	0	0.08	C	0.92
226	0	1	0	0	C	1
227	0	0	1	0	G	1
228	0	0.07	0	0.93	T	0.93
229	0	0	1	0	G	1
230	1	0	0	0	A	1
231	1	0	0	0	A	1
232	1	0	0	0	A	1
233	0	1	0	0	C	1
234	0	0.88	0.01	0.1	C	0.88
235	0	0	1	0	G	1
236	0	0	0	1	T	1
237	0.03	0.02	0.1	0.84	T	0.84
238	0	0	1	0	G	1
239	1	0	0	0	A	1
240	0.01	0	0.99	0	G	0.99
241	0	0	0	1	T	1
242	0	0	0	1	T	1
243	0	0.87	0	0.12	C	0.87
244	0	0	1	0	G	1
245	0	1	0	0	C	1
246	0.01	0.72	0.13	0.13	C	0.72
247	0.06	0	0.94	0	G	0.94
248	0.99	0	0.01	0	A	0.99
249	0	0.78	0	0.21	C	0.78
250	1	0	0	0	A	1
251	1	0	0	0	A	1
252	0.96	0	0.04	0	A	0.96
253	0.13	0.12	0.09	0.66	T	0.66
254	0.01	0.98	0	0.01	C	0.98
255	0.04	0.83	0.01	0.12	C	0.83
256	0.01	0	0.99	0	G	0.99
257	0.99	0	0.01	0	A	0.99
258	0.42	0.11	0.43	0.04	G	0.43
259	0	0.97	0	0.03	C	0.97
260	0	0	0	1	T	1
261	0.35	0.01	0.61	0.02	G	0.61
262	0.95	0	0.05	0	A	0.95
263	0.8	0.14	0.05	0.01	A	0.8
264	0.36	0.52	0.1	0.02	C	0.52
265	0.53	0.37	0.08	0.02	A	0.53
266	0	0.01	0	0.99	T	0.99
267	0.18	0.35	0.05	0.42	T	0.42
268	0	0	1	0	G	1
269	0.91	0.01	0	0.08	A	0.91
270	0.13	0	0.86	0	G	0.86
271	0	0.98	0.01	0	C	0.98
272	1	0	0	0	A	1
273	0.64	0	0.35	0	A	0.64
274	0	0	1	0	G	1
275	0	1	0	0	C	1
276	0	0.11	0	0.88	T	0.88
277	0	0	0	1	T	1
278	1	0	0	0	A	1
279	0	0.29	0	0.71	T	0.71
280	0	1	0	0	C	1
281	0	0	1	0	G	1
282	0.17	0.68	0.01	0.13	C	0.68
283	0	0	1	0	G	1
284	1	0	0	0	A	1
285	0	0.01	0	0.99	T	0.99
286	0	0	1	0	G	1
287	1	0	0	0	A	1
288	1	0	0	0	A	1
289	1	0	0	0	A	1
290	0	1	0	0	C	1
291	0	0.94	0	0.06	C	0.94
292	0	0	1	0	G	1
293	1	0	0	0	A	1
294	0	1	0	0	C	1
295	0	1	0	0	C	1
296	0	0	1	0	G	1
297	0	0.95	0	0.05	C	0.95
298	0	0	1	0	G	1
299	1	0	0	0	A	1
300	1	0	0	0	A	1
301	0	0	0	1	T	1
302	0.94	0	0.03	0.02	A	0.94
303	0.01	0.14	0.01	0.85	T	0.85
304	0	0.98	0	0.02	C	0.98
305	0	0	0	1	T	1
306	0.36	0.01	0.61	0.02	G	0.61
307	0	0.45	0	0.55	T	0.55
308	0.49	0.5	0	0	C	0.5
309	0.89	0.04	0.04	0.03	A	0.89
310	0	0	1	0	G	1
311	0	0	1	0	G	1
312	0	0.26	0	0.74	T	0.74
313	0.01	0.97	0.01	0.02	C	0.97
314	1	0	0	0	A	1
315	0.76	0.09	0.14	0.01	A	0.76
316	0	0	0	0	-	0
317	0	0	0	0	-	0
318	0	0	0	0	-	0
319	0	0	1	0	G	1
320	0	0	1	0	G	1
321	0	0.03	0	0.97	T	0.97
322	0	0	1	0	G	1
323	1	0	0	0	A	1
324	1	0	0	0	A	1
325	1	0	0	0	A	1
326	0	1	0	0	C	1
327	0.14	0.26	0.03	0.57	T	0.57
328	0	1	0	0	C	1
329	0	0	1	0	G	1
330	0	0.29	0	0.71	T	0.71
331	0	0	1	0	G	1
332	1	0	0	0	A	1
333	0.53	0	0.46	0	A	0.53
334	0	0.93	0	0.07	C	0.93
335	0	0	0	1	T	1
336	0.48	0.01	0.36	0.15	A	0.48
337	0	0.02	0	0.98	T	0.98
338	0.26	0	0.73	0	G	0.73
339	0	0.62	0	0.38	C	0.62
340	0	0	1	0	G	1
341	1	0	0	0	A	1
342	1	0	0	0	A	1
343	0	0	1	0	G	1
344	0	0	1	0	G	1
345	0	0.99	0	0.01	C	0.99
346	0	1	0	0	C	1
347	1	0	0	0	A	1
348	0.99	0	0.01	0	A	0.99
349	0	0	1	0	G	1
350	0	0	0	1	T	1
351	0.01	0.01	0.97	0	G	0.97
352	0	0	1	0	G	1
353	0	0.99	0	0.01	C	0.99
354	0.12	0.06	0.57	0.24	G	0.57
355	1	0	0	0	A	1
356	0	0	0	1	T	1
357	0	0	0	1	T	1
358	0	0	0	1	T	1
359	0	0	0	1	T	1
360	0	0	0	1	T	1
361	0	0	1	0	G	1
362	1	0	0	0	A	1
363	0.95	0.02	0.02	0.01	A	0.95
364	1	0	0	0	A	1
365	1	0	0	0	A	1
366	0	1	0	0	C	1
367	0.17	0	0.82	0	G	0.82
368	1	0	0	0	A	1
369	0	0.9	0	0.1	C	0.9
370	0.99	0	0.01	0	A	0.99
371	1	0	0	0	A	1
372	1	0	0	0	A	1
373	0	0	1	0	G	1
374	0	1	0	0	C	1
375	0.03	0.11	0.81	0.05	G	0.81
376	0	0	0	1	T	1
377	1	0	0	0	A	1
378	0	1	0	0	C	1
379	0	1	0	0	C	1
380	0	0	1	0	G	1
381	0	0.93	0	0.07	C	0.93
382	0	0	0	1	T	1
383	0	0	0	1	T	1
384	0	1	0	0	C	1
385	0	0.98	0	0.02	C	0.98
386	0.98	0	0.02	0	A	0.98
387	0	1	0	0	C	1
388	0	0	1	0	G	1
389	0	0	1	0	G	1
390	0	0.25	0	0.75	T	0.75
391	0	0	1	0	G	1
392	1	0	0	0	A	1
393	0	0.95	0	0.05	C	0.95
394	1	0	0	0	A	1
395	1	0	0	0	A	1
396	0	1	0	0	C	1
397	0	1	0	0	C	1
398	0	0	1	0	G	1
399	0.55	0.09	0.34	0.02	A	0.55
400	0	0	1	0	G	1
401	0	0	0	1	T	1
402	0.9	0.02	0.06	0.02	A	0.9
403	0	0	0	0	-	0
404	0	0	0	0	-	0
405	0	0	0	0	-	0
406	0	0	0	0	-	0
407	0	0	0	0	-	0
408	0	0	0	0	-	0
409	0.99	0.01	0	0	A	0.99
410	0	0	1	0	G	1
411	0.98	0.01	0.01	0	A	0.98
412	1	0	0	0	A	1
413	1	0	0	0	A	1
414	1	0	0	0	A	1
415	0	0	1	0	G	1
416	0	0	0	1	T	1
417	0	0	1	0	G	1
418	0	0	1	0	G	1
419	0	0	0	1	T	1
420	0	0	1	0	G	1
421	0	1	0	0	C	1
422	0	0	0	1	T	1
423	0.03	0.02	0.95	0	G	0.95
424	1	0	0	0	A	1
425	1	0	0	0	A	1
426	1	0	0	0	A	1
427	0	0	1	0	G	1
428	0	0	0	1	T	1
429	0.02	0.02	0.96	0	G	0.96
430	1	0	0	0	A	1
431	0	1	0	0	C	1
432	0.02	0.89	0.06	0.03	C	0.89
433	1	0	0	0	A	1
434	0	0	0	1	T	1
435	0	0.96	0	0.04	C	0.96
436	0	0	1	0	G	1
437	1	0	0	0	A	1
438	1	0	0	0	A	1
439	0	0	1	0	G	1
440	1	0	0	0	A	1
441	0	0	0	1	T	1
442	0	0	1	0	G	1
443	0	0	1	0	G	1
444	0	0.96	0	0.04	C	0.96
445	0	0	0	1	T	1
446	1	0	0	0	A	1
447	0	0.99	0	0.01	C	0.99
448	0	0	0	1	T	1
449	0	0	0	1	T	1
450	0	1	0	0	C	1
451	0	0.98	0	0.02	C	0.98
452	0	0	0	1	T	1
453	0.66	0.09	0.21	0.04	A	0.66
454	1	0	0	0	A	1
455	1	0	0	0	A	1
456	0	0.04	0	0.96	T	0.96
457	1	0	0	0	A	1
458	1	0	0	0	A	1
459	0.89	0	0.11	0	A	0.89
460	0	0	0	1	T	1
461	1	0	0	0	A	1
462	1	0	0	0	A	1


The most probable ancestral DNA sequence is:
ATGATCGTGTTAGACAGCTTAGAGCAATTCAAAGTGGTATATCGCAACGGTCGTAAATGGAACCGCTGTGTGGAAGCCATTGACAACATCGACAACATCAAAGATGGCGTGATGCACTCGATTGGCGATTCACTGGTTTACATGGTTGAAGACGGCATCGCACAACAAACCGAAACCTTTATCGGCAACCGTCGTTACTTCGATGTGCATTACTACCTCGAAGGCCGTGAAACCGTTGAGTTCGCCGACAAATCCGAGCTGAACATTGAGCAAGCTTATCGCGATGAAACCGACCGCGAATATCTGTCAGGTCAA---GGTGAAACTCGTGAACTATGCGAAGGCCAAGTGGCGATTTTTGAAAACGACAAAGCGTACCGCTTCCACGGTGACAACCGAGTA------AGAAAAGTGGTGCTGAAAGTGACCATCGAAGATGGCTACTTCCTAAATAAATAA

The most probable DNA sequence without gaps is:
ATGATCGTGTTAGACAGCTTAGAGCAATTCAAAGTGGTATATCGCAACGGTCGTAAATGGAACCGCTGTGTGGAAGCCATTGACAACATCGACAACATCAAAGATGGCGTGATGCACTCGATTGGCGATTCACTGGTTTACATGGTTGAAGACGGCATCGCACAACAAACCGAAACCTTTATCGGCAACCGTCGTTACTTCGATGTGCATTACTACCTCGAAGGCCGTGAAACCGTTGAGTTCGCCGACAAATCCGAGCTGAACATTGAGCAAGCTTATCGCGATGAAACCGACCGCGAATATCTGTCAGGTCAAGGTGAAACTCGTGAACTATGCGAAGGCCAAGTGGCGATTTTTGAAAACGACAAAGCGTACCGCTTCCACGGTGACAACCGAGTAAGAAAAGTGGTGCTGAAAGTGACCATCGAAGATGGCTACTTCCTAAATAAATAA

The accuracy score for that sequence is 0.946688741721854

The accuracy score is defined as the average probability of
the most probable bases.  It is NOT the probability that the
most probable sequence is correct.  That probability is 7.36766794402929e-14.
The natural log of that probability is -30.2390900712934.

Ancestral Protein Sequence:
Column headings:
MPAA = most probable amino acid, pMPAA = probability of MPAA
MPAA2 = second most probable amino acid, pMPAA2 = probability of MPAA2
Ratio = pMPAA/pMPAA2,  Unreliable means Ratio <1.5

MPAA	pMPAA	MPAA2	pMPAA2	Ratio
M	1	A	0	9999	
I	1	A	0	9999	
V	1	A	0	9999	
L	1	A	0	9999	
D	1	A	0	9999	
S	0.59	N	0.41	1.4390243902439	Unreliable
L	1	A	0	9999	
E	0.99	A	0	9999	
Q	1	A	0	9999	
F	1	A	0	9999	
K	1	A	0	9999	
V	0.395	L	0.3871	1.02040816326531	Unreliable
V	1	A	0	9999	
Y	1	A	0	9999	
R	1	A	0	9999	
N	0.95	D	0.05	19	
G	1	A	0	9999	
R	1	A	0	9999	
K	1	A	0	9999	
W	1	A	0	9999	
N	1	A	0	9999	
R	1	A	0	9999	
C	1	A	0	9999	
V	1	A	0	9999	
E	1	A	0	9999	
A	1	R	0	9999	
I	1	A	0	9999	
D	0.7569	N	0.1131	6.69230769230769	
N	1	A	0	9999	
I	1	A	0	9999	
D	0.66	G	0.33	2	
N	1	A	0	9999	
I	1	A	0	9999	
K	1	A	0	9999	
D	0.99	A	0	9999	
G	1	A	0	9999	
V	0.99	A	0	9999	
M	1	A	0	9999	
H	1	A	0	9999	
S	1.01	A	0	9999	
I	1	A	0	9999	
G	1	A	0	9999	
D	1	A	0	9999	
S	1	A	0	9999	
L	1	A	0	9999	
V	1	A	0	9999	
Y	1	A	0	9999	
M	1	A	0	9999	
V	0.55	I	0.45	1.22222222222222	Unreliable
E	1	A	0	9999	
D	1	A	0	9999	
G	1	A	0	9999	
I	0.9016	V	0.0784	11.5	
A	0.98	T	0.02	49	
Q	0.693	K	0.2475	2.8	
Q	0.3216	K	0.3149	1.02127659574468	Unreliable
T	0.99	A	0	9999	
E	0.99	D	0.01	99	
T	0.4257	I	0.336798	1.26396237507349	Unreliable
F	1	A	0	9999	
I	0.601524	V	0.3724	1.61526315789474	
G	0.99	A	0	9999	
N	1	A	0	9999	
R	1	A	0	9999	
R	1	A	0	9999	
Y	1	A	0	9999	
F	1	A	0	9999	
D	1	A	0	9999	
V	1	A	0	9999	
H	1	A	0	9999	
Y	1	A	0	9999	
Y	1	A	0	9999	
L	1.01	A	0	9999	
E	1	A	0	9999	
G	1	A	0	9999	
R	1	A	0	9999	
E	1	A	0	9999	
T	0.99	A	0	9999	
V	0.99	A	0	9999	
E	1	A	0	9999	
F	0.99	A	0	9999	
A	0.99	R	0	9999	
D	0.921294	N	0.058806	15.6666666666667	
K	1	A	0	9999	
S	0.6468	T	0.1274	5.07692307692308	
E	0.833085	D	0.147015	5.66666666666667	
L	0.9891	F	0.0009	1099	
N	0.4104	K	0.3496	1.17391304347826	Unreliable
I	0.498465	L	0.370854	1.34410037373198	Unreliable
E	0.9009	V	0.0792	11.375	
Q	0.9702	E	0.0099	98	
A	0.99	R	0	9999	
Y	1	A	0	9999	
R	0.99	A	0	9999	
D	1	A	0	9999	
E	1	A	0	9999	
T	1	A	0	9999	
D	1	A	0	9999	
R	1	A	0	9999	
E	1	A	0	9999	
Y	0.9306	C	0.0297	31.3333333333333	
L	0.9994	F	0.0006	1665.66666666667	
S	0.275	X	0.250635	1.0972130787799	Unreliable
G	1	A	0	9999	
Q	0.873	H	0.097	9	
	0	-	0	0
G	1	A	0	9999	
E	1	A	0	9999	
T	1	A	0	9999	
R	1	A	0	9999	
E	0.99	A	0	9999	
L	0.9888	F	0.0112	88.2857142857143	
C	0.7154	Y	0.2548	2.80769230769231	
E	1	A	0	9999	
G	1	A	0	9999	
Q	1	A	0	9999	
V	0.99	A	0	9999	
A	0.9801	V	0.0099	99	
I	1	A	0	9999	
F	1	A	0	9999	
E	0.97	D	0.03	32.3333333333333	
N	1	A	0	9999	
D	0.82	N	0.17	4.8235294117647	
K	0.99	E	0.01	99	
A	1	R	0	9999	
Y	1	A	0	9999	
R	1	A	0	9999	
F	1	A	0	9999	
H	0.9604	R	0.0196	49	
G	1	A	0	9999	
D	1	A	0	9999	
N	1	A	0	9999	
R	1	A	0	9999	
V	1	A	0	9999	
	0	-	0	0
	0	-	0	0
R	0.9901	S	0.0099	100.010101010101	
K	1	A	0	9999	
V	1	A	0	9999	
V	1	A	0	9999	
L	1	A	0	9999	
K	1	A	0	9999	
V	1	A	0	9999	
T	1	A	0	9999	
I	1	A	0	9999	
E	1	A	0	9999	
D	1	A	0	9999	
G	1	A	0	9999	
Y	1	A	0	9999	
F	1	A	0	9999	
L	0.9974	F	0.0026	383.615384615385	
N	1	A	0	9999	
K	1	A	0	9999	
X	1	A	0	9999	


The most probable ancestral protein sequence is:
MIVLDSLEQFKVVYRNGRKWNRCVEAIDNIDNIKDGVMHSIGDSLVYMVEDGIAQQTETFIGNRRYFDVHYYLEGRETVEFADKSELNIEQAYRDETDREYLSGQ-GETRELCEGQVAIFENDKAYRFHGDNRV--RKVVLKVTIEDGYFLNKX

The most probable ancestral protein sequence without gaps is:
MIVLDSLEQFKVVYRNGRKWNRCVEAIDNIDNIKDGVMHSIGDSLVYMVEDGIAQQTETFIGNRRYFDVHYYLEGRETVEFADKSELNIEQAYRDETDREYLSGQGETRELCEGQVAIFENDKAYRFHGDNRVRKVVLKVTIEDGYFLNKX

The accuracy score for that sequence is 0.94944217218543

The accuracy score is defined as the average probability of
the most probable amino acids.  It is NOT the probability that the
most probable sequence is correct.  That probability is 2.75914991748918e-05
The natural log of that probability is -10.4980028335929.

